Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-occurrence
Co-expression
Experiments
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[Homology]
Score
AQR96633.1Transcriptional regulator PadR-like family protein. (223 aa)    
Predicted Functional Partners:
AQR96634.1
Homocysteine methyltransferase.
 
     0.573
AQR96632.1
Iron-sulfur flavoprotein.
       0.560
AQR94650.1
Transcriptional regulator PadR-like family protein.
  
     0.459
AQR95833.1
Hypothetical protein.
   
    0.459
AQR96631.1
Phosphodiesterase.
  
    0.443
AQR94588.1
Hypothetical protein.
  
     0.417
AQR96636.1
Ribosomal-protein-alanine N-acetyltransferase.
 
     0.410
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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