Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR96643.1Hypothetical protein. (91 aa)    
Predicted Functional Partners:
nudL
Putative nudix hydrolase NudL.
       0.689
AQR96087.1
Hypothetical protein; Belongs to the UPF0311 family.
  
 0.670
rmlD_2
dTDP-4-dehydrorhamnose reductase.
  
 
 0.657
nprM
Bacillolysin precursor; Extracellular zinc metalloprotease.
   
    0.552
chlD
Hypothetical protein.
   
 0.523
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 0.508
cysC
Putative adenylyl-sulfate kinase.
   
 0.500
tmcAL
Hypothetical protein; Catalyzes the formation of N(4)-acetylcytidine (ac(4)C) at the wobble position of elongator tRNA(Met), using acetate and ATP as substrates. First activates an acetate ion to form acetyladenylate (Ac- AMP) and then transfers the acetyl group to tRNA to form ac(4)C34.
  
    0.479
chuR
Anaerobic sulfatase-maturating enzyme.
   
    0.446
AQR97482.1
Hypothetical protein; Anaerobic sulfatase-maturating enzyme homolog YdeM.
   
    0.446
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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