Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
icaB_3poly-beta-1,6-N-acetyl-D-glucosamine N-deacetylase precursor. (312 aa)    
Predicted Functional Partners:
arnT
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase.
  
 
 0.519
AQR96062.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
 
 0.519
AQR96339.1
Hypothetical protein.
  
 
 0.519
AQR96661.1
Hypothetical protein; Belongs to the UPF0237 family.
       0.471
AQR96660.1
Hypothetical protein.
       0.460
AQR96692.1
Hypothetical protein.
 
   
 0.435
AQR96663.1
Hypothetical protein.
       0.433
AQR96122.1
Hypothetical protein.
  
  
 0.426
AQR96603.1
Hypothetical protein.
 
   
 0.425
AQR93796.1
Hypothetical protein.
 
   
 0.419
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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