Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
glpQ1Putative glycerophosphoryl diester phosphodiesterase 1. (235 aa)    
Predicted Functional Partners:
pldB
Lysophospholipase L2.
 
  
 0.933
ugpB_1
Sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor.
 
  
 0.920
eutA
Reactivating factor for ethanolamine ammonia lyase.
     
 0.911
eutB
Ethanolamine ammonia-lyase heavy chain.
     
  0.900
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
     
  0.900
glpK_1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
 
 0.809
glpK_3
Glycerol kinase.
 
 
 0.809
AQR96676.1
Hypothetical protein.
       0.773
glpF
Glycerol uptake facilitator protein; Belongs to the MIP/aquaporin (TC 1.A.8) family.
  
 
 0.730
araQ_7
L-arabinose transport system permease protein AraQ.
 
  
 0.730
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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