STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glpQ1Putative glycerophosphoryl diester phosphodiesterase 1. (235 aa)    
Predicted Functional Partners:
pldB
Lysophospholipase L2.
 
  
 0.935
ugpB_1
Sn-glycerol-3-phosphate-binding periplasmic protein UgpB precursor.
 
  
 0.928
eutA
Reactivating factor for ethanolamine ammonia lyase.
     
  0.900
eutB
Ethanolamine ammonia-lyase heavy chain.
     
  0.900
eutC
Ethanolamine ammonia-lyase light chain; Belongs to the EutC family.
     
  0.900
glpK_1
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate.
 
 
 0.789
glpK_3
Glycerol kinase.
 
 
 0.789
ugpA_2
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
  
 0.776
AQR96676.1
Hypothetical protein.
       0.773
lhgO
L-2-hydroxyglutarate oxidase LhgO.
 
  
 0.761
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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