Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR96723.1Enterobactin/ferric enterobactin esterase. (263 aa)    
Predicted Functional Partners:
AQR96722.1
Hypothetical protein.
       0.732
bglX_1
Periplasmic beta-glucosidase precursor.
     
 0.668
xynB_3
Beta-xylosidase.
 
     0.651
csoR_1
Copper-sensing transcriptional repressor CsoR.
  
  
 0.619
csoR_2
Copper-sensing transcriptional repressor CsoR.
  
  
 0.619
xynB_4
Beta-xylosidase.
 
     0.563
gloA_2
Lactoylglutathione lyase.
  
 
 0.516
yfcE_2
Phosphodiesterase YfcE.
  
  
 0.501
AQR96721.1
Major facilitator superfamily protein.
     
 0.484
ycdT_1
Putative diguanylate cyclase YcdT.
  
 
  0.472
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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