STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96752.1Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family. (892 aa)    
Predicted Functional Partners:
xylB2
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.767
AQR97200.1
Xylose isomerase-like TIM barrel.
  
     0.735
AQR97201.1
Hypothetical protein.
  
     0.732
AQR96731.1
Hypothetical protein.
  
     0.694
AQR96744.1
Hypothetical protein.
  
     0.693
AQR96745.1
Xylose isomerase-like TIM barrel.
  
     0.681
AQR96732.1
Xylose isomerase-like TIM barrel.
  
     0.677
AQR96767.1
Hypothetical protein.
  
     0.653
AQR97273.1
Putative endoglucanase.
  
  
 0.639
AQR96766.1
Xylose isomerase-like TIM barrel.
  
     0.636
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.