STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96762.1Trehalose utilization. (276 aa)    
Predicted Functional Partners:
glgA_2
Glycogen synthase; Synthesizes alpha-1,4-glucan chains using ADP-glucose.
   
    0.672
AQR95413.1
Neutral/alkaline non-lysosomal ceramidase.
  
     0.665
iolE_2
Inosose dehydratase.
 
   
 0.642
iolE_1
Inosose dehydratase.
 
   
 0.640
ulaA
Ascorbate-specific permease IIC component UlaA.
      
 0.636
galT
Galactose-1-phosphate uridylyltransferase.
      
 0.636
malX_2
PTS system maltose- and glucose-specific EIICB component.
      
 0.636
iolE_3
Inosose dehydratase.
 
   
 0.635
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
      
 0.570
pgl_3
6-phosphogluconolactonase.
  
     0.570
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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