STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96773.1Hypothetical protein. (68 aa)    
Predicted Functional Partners:
AQR96774.1
Hypothetical protein.
 
     0.952
spoVAD_2
Stage V sporulation protein AD.
 
     0.908
spoVAC2
SpoVA protein.
 
     0.887
AQR96778.1
Hypothetical protein.
 
     0.833
spoVAEB2
SpoVA protein.
 
     0.826
AQR96282.1
Hypothetical protein.
  
     0.548
AQR96522.1
2',5' RNA ligase family.
  
     0.468
AQR93458.1
Hypothetical protein.
  
     0.463
ndhF
Nicotinate dehydrogenase FAD-subunit.
  
     0.438
citS_1
Sensor protein CitS.
  
     0.428
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.