Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
emrA_1Multidrug export protein EmrA. (217 aa)    
Predicted Functional Partners:
emrB_2
Multidrug export protein EmrB; Belongs to the major facilitator superfamily.
 
 0.947
emrK_5
Putative multidrug resistance protein EmrK.
 
     0.931
macB_3
Macrolide export ATP-binding/permease protein MacB.
  
 
 0.821
yusO_2
Putative HTH-type transcriptional regulator YusO.
 
  
 0.800
emrB_1
Multidrug export protein EmrB; Belongs to the major facilitator superfamily.
 
 0.782
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
  
 0.742
emrY
Putative multidrug resistance protein EmrY; Belongs to the major facilitator superfamily.
 
 0.731
emrK_1
Putative multidrug resistance protein EmrK.
 
     0.713
macB_4
Macrolide export ATP-binding/permease protein MacB.
 
 
 0.704
AQR97520.1
Putative efflux pump membrane fusion protein.
  
     0.697
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.