Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ulaAAscorbate-specific permease IIC component UlaA. (485 aa)    
Predicted Functional Partners:
ulaB
Ascorbate-specific phosphotransferase enzyme IIB component.
 
 
 0.999
ulaC
Ascorbate-specific phosphotransferase enzyme IIA component.
 
 
 0.995
ulaG
Putative L-ascorbate-6-phosphate lactonase UlaG.
 
 
 0.995
ptsH
Phosphocarrier protein HPr.
    
 0.913
malX_2
PTS system maltose- and glucose-specific EIICB component.
  
 
 0.857
licR_2
Putative licABCH operon regulator.
 
 
 0.836
licR_1
Putative licABCH operon regulator.
 
 
 0.832
mtlR
Transcriptional regulator MtlR.
  
 
 0.805
AQR96792.1
Hypothetical protein.
 
     0.798
bglF_1
PTS system beta-glucoside-specific EIIBCA component.
  
 
 0.797
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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