Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR96826.1Bacterial dynamin-like protein. (589 aa)    
Predicted Functional Partners:
era_2
GTPase Era.
 
   
 0.952
AQR96828.1
Bacterial dynamin-like protein.
 
    
0.867
AQR96827.1
Hypothetical protein.
       0.825
AQR95973.1
HIRAN domain protein.
 
   
 0.769
toxA_6
Toxin A.
 
     0.761
AQR94429.1
Hypothetical protein; Glycosyltransferase family 28 C-terminal domain.
  
     0.758
AQR94021.1
ST7 protein.
  
     0.753
AQR93217.1
Glutathionylspermidine synthase.
  
 
   0.752
AQR93239.1
Hypothetical protein.
  
    0.745
AQR93772.1
Hypothetical protein.
  
     0.744
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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