STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
glnA_1Glutamine synthetase. (697 aa)    
Predicted Functional Partners:
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.995
gltB_1
Glutamate synthase [NADPH] small chain.
    
 0.984
carA
Carbamoyl-phosphate synthase small chain; Belongs to the CarA family.
  
 
  0.980
carB_1
Carbamoyl-phosphate synthase large chain; Belongs to the CarB family.
  
 
 0.979
gltD_2
Glutamate synthase [NADPH] small chain.
    
 0.977
gltD_1
Glutamate synthase [NADPH] small chain.
    
 0.960
gltD_5
Glutamate synthase [NADPH] small chain.
    
 0.960
cysI
Sulfite reductase [NADPH] hemoprotein beta-component; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
     
 0.955
gltD_3
Glutamate synthase [NADPH] small chain.
    
 0.953
carB_2
Carbamoyl-phosphate synthase large chain.
  
 
 0.952
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.