Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of proteins in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AQR93922.1 | sigF_2 | CLSAP_12290 | CLSAP_12280 | PRC-barrel domain protein. | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.871 |
| AQR93922.1 | spoIIE | CLSAP_12290 | CLSAP_01230 | PRC-barrel domain protein. | Stage II sporulation protein E. | 0.680 |
| AQR93922.1 | spoIIGA | CLSAP_12290 | CLSAP_12260 | PRC-barrel domain protein. | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.831 |
| AQR93922.1 | spoIIID | CLSAP_12290 | CLSAP_06330 | PRC-barrel domain protein. | Stage III sporulation protein D. | 0.543 |
| AQR93922.1 | yqfd | CLSAP_12290 | CLSAP_09670 | PRC-barrel domain protein. | Putative stage IV sporulation protein YqfD. | 0.724 |
| AQR93922.1 | ytfJ | CLSAP_12290 | CLSAP_25870 | PRC-barrel domain protein. | Putative spore protein YtfJ. | 0.658 |
| AQR93922.1 | yunB | CLSAP_12290 | CLSAP_42380 | PRC-barrel domain protein. | Sporulation protein YunB. | 0.755 |
| AQR97753.1 | yunB | CLSAP_50860 | CLSAP_42380 | Acetyltransferase (GNAT) family protein. | Sporulation protein YunB. | 0.721 |
| cotJB | spoIIE | CLSAP_29760 | CLSAP_01230 | CotJB protein. | Stage II sporulation protein E. | 0.661 |
| cotJB | spoIIGA | CLSAP_29760 | CLSAP_12260 | CotJB protein. | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.494 |
| cotJB | spoIIID | CLSAP_29760 | CLSAP_06330 | CotJB protein. | Stage III sporulation protein D. | 0.672 |
| cotJB | yqfd | CLSAP_29760 | CLSAP_09670 | CotJB protein. | Putative stage IV sporulation protein YqfD. | 0.406 |
| cotJB | yunB | CLSAP_29760 | CLSAP_42380 | CotJB protein. | Sporulation protein YunB. | 0.650 |
| ponA | yunB | CLSAP_42390 | CLSAP_42380 | Penicillin-binding protein 1A/1B. | Sporulation protein YunB. | 0.694 |
| sigF_2 | AQR93922.1 | CLSAP_12280 | CLSAP_12290 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PRC-barrel domain protein. | 0.871 |
| sigF_2 | spoIIE | CLSAP_12280 | CLSAP_01230 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage II sporulation protein E. | 0.948 |
| sigF_2 | spoIIGA | CLSAP_12280 | CLSAP_12260 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Sporulation sigma-E factor-processing peptidase; Probable aspartic protease that is responsible for the proteolytic cleavage of the RNA polymerase sigma E factor (SigE/spoIIGB) to yield the active peptide in the mother cell during sporulation. Responds to a signal from the forespore that is triggered by the extracellular signal protein SpoIIR. Belongs to the peptidase U4 family. | 0.948 |
| sigF_2 | spoIIID | CLSAP_12280 | CLSAP_06330 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Stage III sporulation protein D. | 0.900 |
| sigF_2 | yqfd | CLSAP_12280 | CLSAP_09670 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative stage IV sporulation protein YqfD. | 0.695 |
| sigF_2 | ytfJ | CLSAP_12280 | CLSAP_25870 | RNA polymerase sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Putative spore protein YtfJ. | 0.895 |
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