Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
cysLHTH-type transcriptional regulator CysL; Belongs to the LysR transcriptional regulatory family. (291 aa)    
Predicted Functional Partners:
AQR96921.1
Hypothetical protein.
 
     0.860
cynR_2
HTH-type transcriptional regulator CynR; Belongs to the LysR transcriptional regulatory family.
  
    0.745
gltC_1
HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family.
  
     0.733
hcaR
Hca operon transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
     0.705
gltB_2
Ferredoxin-dependent glutamate synthase 1.
     
 0.457
asrC_2
Anaerobic sulfite reductase subunit C; Belongs to the nitrite and sulfite reductase 4Fe-4S domain family.
       0.455
crp_1
cAMP-activated global transcriptional regulator CRP.
  
 
 0.445
ntcA
Global nitrogen regulator.
  
 
 0.444
crp_3
cAMP receptor protein.
  
 
 0.442
crp_2
cAMP receptor protein.
  
 
 0.429
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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