STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
yloBCalcium-transporting ATPase. (874 aa)    
Predicted Functional Partners:
AQR96936.1
Cobalt-dependent inorganic pyrophosphatase.
     
 0.659
AQR95701.1
Putative Mg(2+) transport ATPase.
  
 
 0.611
AQR93672.1
Thermophilic serine proteinase precursor.
   
 
 0.590
hag_2
Flagellin; Flagellin is the subunit protein which polymerizes to form the filaments of bacterial flagella.
  
    0.546
clcA
H(+)/Cl(-) exchange transporter ClcA.
  
 
 0.543
copA_3
Copper-exporting P-type ATPase A.
 
0.507
copA_1
Copper-exporting P-type ATPase A.
 
0.475
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
  
 
 0.473
spoIVFB
Stage IV sporulation protein FB.
 
    0.466
adhE_3
Aldehyde-alcohol dehydrogenase.
   
 0.457
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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