STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgaCpoly-beta-1,6-N-acetyl-D-glucosamine synthase. (298 aa)    
Predicted Functional Partners:
AQR96977.1
Hypothetical protein.
  
  
 0.819
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.787
rfbD
UDP-galactopyranose mutase precursor.
 
 
 0.783
rmlD_2
dTDP-4-dehydrorhamnose reductase.
 
 
 0.723
AQR96930.1
N-glycosyltransferase.
 
  
 0.678
tagG
Teichoic acid translocation permease protein TagG.
 
  
 0.651
fliN
Flagellar motor switch protein FliN.
    
   0.643
trg_2
Methyl-accepting chemotaxis protein III.
   
    0.638
tap_1
Methyl-accepting chemotaxis protein IV.
   
    0.638
yoaH_6
Putative methyl-accepting chemotaxis protein YoaH.
   
    0.638
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.