STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR96982.1Hypothetical protein. (318 aa)    
Predicted Functional Partners:
neuB
N,N'-diacetyllegionaminic acid synthase.
 
 
 0.995
pseI
Pseudaminic acid synthase.
 
 
 0.991
kdsB_1
3-deoxy-manno-octulosonate cytidylyltransferase.
 
  
 0.977
kdsB_2
3-deoxy-manno-octulosonate cytidylyltransferase.
 
  
 0.897
pseB
UDP-N-acetylglucosamine 4,6-dehydratase.
 
  
 0.864
arnB
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase; Belongs to the DegT/DnrJ/EryC1 family.
 
 
 0.850
epsN
Putative pyridoxal phosphate-dependent aminotransferase EpsN.
 
 
 0.833
maa_2
Maltose O-acetyltransferase.
  
  
 0.832
hddC
D-glycero-alpha-D-manno-heptose 1-phosphate guanylyltransferase.
 
  
 0.810
fdtB
dTDP-3-amino-3,6-dideoxy-alpha-D-galactopyranose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
  
 
 0.801
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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