STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR96993.1PGL/p-HBAD biosynthesis glycosyltransferase. (355 aa)    
Predicted Functional Partners:
fcl
GDP-L-fucose synthase.
 
 
 0.930
gmd
GDP-mannose 4,6-dehydratase.
 
  
 0.846
epsJ_2
Putative glycosyltransferase EpsJ.
 
    
0.779
AQR96990.1
Hypothetical protein.
  
 
 0.734
AQR96991.1
Glycosyltransferase sugar-binding region containing DXD motif protein.
  
  
 0.705
epsE_2
Putative glycosyltransferase EpsE.
  
     0.697
AQR96994.1
Hypothetical protein.
       0.689
mfpsA
Mannosylfructose-phosphate synthase.
 
 
 0.673
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.633
pgaC
poly-beta-1,6-N-acetyl-D-glucosamine synthase.
 
  
 0.629
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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