STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR97011.1Sulfatase. (613 aa)    
Predicted Functional Partners:
cysC
Putative adenylyl-sulfate kinase.
     
 0.695
pkn1
Serine/threonine-protein kinase pkn1.
  
   0.645
kdsB_2
3-deoxy-manno-octulosonate cytidylyltransferase.
       0.639
ppaX_2
Pyrophosphatase PpaX.
 
    0.615
puuD
Gamma-glutamyl-gamma-aminobutyrate hydrolase PuuD.
       0.572
AQR97009.1
Hypothetical protein.
       0.572
glmU_2
Bifunctional protein GlmU.
       0.553
nadK
NAD kinase; Involved in the regulation of the intracellular balance of NAD and NADP, and is a key enzyme in the biosynthesis of NADP. Catalyzes specifically the phosphorylation on 2'-hydroxyl of the adenosine moiety of NAD to yield NADP.
   
 
  0.541
gltB_2
Ferredoxin-dependent glutamate synthase 1.
   
  
 0.492
ubiE_7
Ubiquinone/menaquinone biosynthesis C-methyltransferase UbiE.
       0.490
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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