STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
aspBAspartate aminotransferase. (397 aa)    
Predicted Functional Partners:
pheA
P-protein.
 
 
 0.996
asnO
Asparagine synthetase 3.
  
 
 0.987
lysC
Aspartate kinase Ask_LysC; Belongs to the aspartokinase family.
 
 0.983
yclM
Aspartokinase 3; Belongs to the aspartokinase family.
  
 0.978
aspA_1
Aspartate ammonia-lyase.
    
 0.971
aspA_2
Aspartate ammonia-lyase.
    
 0.971
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.968
ilvC_2
Ketol-acid reductoisomerase.
  
 
 0.966
ldh
L-lactate dehydrogenase; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.960
ldh1_1
L-lactate dehydrogenase 1; Catalyzes the conversion of lactate to pyruvate. Belongs to the LDH/MDH superfamily. LDH family.
  
 0.960
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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