STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
znuBHigh-affinity zinc uptake system membrane protein ZnuB. (266 aa)    
Predicted Functional Partners:
znuC
High-affinity zinc uptake system ATP-binding protein ZnuC.
 
 0.999
znuA_2
High-affinity zinc uptake system binding-protein ZnuA precursor; Belongs to the bacterial solute-binding protein 9 family.
 
 
 0.997
znuA_1
High-affinity zinc uptake system binding-protein ZnuA precursor.
 
 
 0.965
mntR_1
Transcriptional regulator MntR.
  
 
 0.736
mntR_2
Transcriptional regulator MntR.
  
 
 0.736
glnP_3
Glutamine transport system permease protein GlnP.
   
 
 0.714
mntH_1
Divalent metal cation transporter MntH.
  
  
 0.670
mntH_2
Divalent metal cation transporter MntH.
  
  
 0.670
artQ_1
Arginine transport system permease protein ArtQ.
   
 
 0.660
occM
Octopine transport system permease protein OccM.
   
 
 0.660
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.