STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolD3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase. (377 aa)    
Predicted Functional Partners:
pphA
Phosphonopyruvate hydrolase.
 
 0.999
phnW
2-aminoethylphosphonate--pyruvate transaminase; Involved in phosphonate degradation; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family. PhnW subfamily.
 
 
 0.968
nifJ_1
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.947
nifJ_2
Pyruvate-flavodoxin oxidoreductase.
  
 
 0.947
spsI_1
Bifunctional IPC transferase and DIPP synthase.
 
  
  0.918
ilvH
Acetolactate synthase small subunit.
  
 0.896
ilvN
Acetolactate synthase isozyme 1 small subunit.
  
 0.896
AQR93590.1
Serine-pyruvate aminotransferase.
 
 
 0.866
adhE_3
Aldehyde-alcohol dehydrogenase.
  
 0.842
adhE_5
Aldehyde-alcohol dehydrogenase; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
  
 0.842
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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