Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
nspCCarboxynorspermidine/carboxyspermidine decarboxylase. (380 aa)    
Predicted Functional Partners:
AQR97090.1
Carboxynorspermidine synthase.
 
 
 0.994
speE
Spermidine synthase; Catalyzes the irreversible transfer of a propylamine group from the amino donor S-adenosylmethioninamine (decarboxy-AdoMet) to putrescine (1,4-diaminobutane) to yield spermidine; Belongs to the spermidine/spermine synthase family.
  
 0.773
patA_2
Putative N-acetyl-LL-diaminopimelate aminotransferase.
  
 
 0.683
patA_4
Putative N-acetyl-LL-diaminopimelate aminotransferase.
  
 
 0.683
aspC
Aspartate aminotransferase.
  
 
 0.683
aspB
Aspartate aminotransferase.
  
 
 0.683
dapF
Diaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6-diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso-DAP), a precursor of L- lysine and an essential component of the bacterial peptidoglycan.
  
 0.681
AQR97088.1
Hypothetical protein.
       0.664
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
  
  
 0.663
pheA
P-protein.
     
 0.631
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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