STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97106.1Hypothetical protein. (245 aa)    
Predicted Functional Partners:
AQR97105.1
Hypothetical protein.
 
  
 0.968
tsaB
tRNA threonylcarbamoyladenosine biosynthesis protein TsaB.
  
    0.617
flgC
Flagellar basal-body rod protein FlgC; Belongs to the flagella basal body rod proteins family.
    
 
 0.569
gpmA
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase; Catalyzes the interconversion of 2-phosphoglycerate and 3- phosphoglycerate.
  
    0.566
ssbA_1
Single-stranded DNA-binding protein A.
   
   0.530
ssbB
Single-stranded DNA-binding protein B.
   
   0.530
ssbA_2
Single-stranded DNA-binding protein A.
   
   0.530
ssbA_3
Single-stranded DNA-binding protein A.
   
   0.530
bdlA
Biofilm dispersion protein BdlA.
  
    0.509
AQR93108.1
Mov34/MPN/PAD-1 family protein.
  
  
 0.508
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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