Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AQR97121.1Branched-chain amino acid transport system / permease component. (318 aa)    
Predicted Functional Partners:
mglA_3
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 
 0.991
AQR97122.1
Beta-methylgalactoside transporter inner membrane component; Belongs to the binding-protein-dependent transport system permease family.
 
0.987
tmpC_2
Membrane lipoprotein TmpC precursor.
 
 
 0.969
mglA_1
Galactose/methyl galactoside import ATP-binding protein MglA.
 
 
 0.964
lsrA
Autoinducer 2 import ATP-binding protein LsrA.
 
 
 0.964
AQR94316.1
Beta-methylgalactoside transporter inner membrane component.
 
0.948
tmpC_1
Membrane lipoprotein TmpC precursor.
 
 
 0.945
mglA_2
Galactose/methyl galactoside import ATP-binding protein MglA.
 
  
 0.642
xylG_1
Xylose import ATP-binding protein XylG; Part of the ABC transporter complex XylFGH involved in xylose import. Responsible for energy coupling to the transport system. Belongs to the ABC transporter superfamily. Xylose importer (TC 3.A.1.2.4) family.
 
  
 0.622
araG
Arabinose import ATP-binding protein AraG.
 
  
 0.621
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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