Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
albA_4Antilisterial bacteriocin subtilosin biosynthesis protein AlbA. (389 aa)    
Predicted Functional Partners:
AQR97175.1
DNA-binding transcriptional regulator AsnC.
 
 0.994
AQR97174.1
Hypothetical protein.
 
 
 0.993
albA_3
Antilisterial bacteriocin subtilosin biosynthesis protein AlbA.
 
 
 
0.978
nasF
uroporphyrinogen-III C-methyltransferase.
 
 
 0.592
hemE
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
  
 
 0.573
AQR97178.1
Hypothetical protein.
       0.514
ytvI
Pheromone autoinducer 2 transporter.
  
    0.462
algA_1
Alginate biosynthesis protein AlgA.
  
    0.433
algA_2
Alginate biosynthesis protein AlgA.
  
    0.433
moaC
Cyclic pyranopterin monophosphate synthase accessory protein; Catalyzes the conversion of (8S)-3',8-cyclo-7,8- dihydroguanosine 5'-triphosphate to cyclic pyranopterin monophosphate (cPMP); Belongs to the MoaC family.
    
 0.432
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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