Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
licR_3Putative licABCH operon regulator. (655 aa)    
Predicted Functional Partners:
fruA_2
PTS system fructose-specific EIIABC component.
 
 
 0.997
mtlA
PTS system mannitol-specific EIICBA component.
 
 
 0.970
mtlR
Transcriptional regulator MtlR.
 
 
 0.962
licR_1
Putative licABCH operon regulator.
 
 
0.936
licR_2
Putative licABCH operon regulator.
 
 
0.936
manP
PTS system mannose-specific EIIBCA component.
 
 
 0.933
fruA_3
PTS system fructose-specific EIIBC component.
 
 
 0.930
ulaC
Ascorbate-specific phosphotransferase enzyme IIA component.
 
 
 0.905
mtlD
Mannitol-1-phosphate 5-dehydrogenase.
 
  
 0.881
manX_3
PTS system mannose-specific EIIAB component.
    
 0.878
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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