Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
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[Homology]
Score
gltC_5HTH-type transcriptional regulator GltC; Belongs to the LysR transcriptional regulatory family. (302 aa)    
Predicted Functional Partners:
metE_2
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
 
  
 0.708
gltB_2
Ferredoxin-dependent glutamate synthase 1.
 
   
 0.518
metE_1
5-methyltetrahydropteroyltriglutamate-- homocysteine methyltransferase.
 
  
 0.483
AQR95863.1
Cyclic nucleotide-binding domain protein.
  
 
 0.450
catM_2
HTH-type transcriptional regulator CatM.
  
     0.447
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
 
 0.427
graS_2
Sensor histidine kinase GraS.
  
  
 0.412
graR_2
Response regulator protein GraR.
  
  
 0.411
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.410
rpoC
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
    
 
 0.406
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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