STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97273.1Putative endoglucanase. (431 aa)    
Predicted Functional Partners:
AQR97274.1
Hypothetical protein.
 
     0.855
AQR97289.1
Glycosyl hydrolases family 2, sugar binding domain.
  
 
 0.731
AQR96752.1
Glycosyl hydrolases family 2, sugar binding domain; Belongs to the glycosyl hydrolase 2 family.
  
 
 0.699
AQR93729.1
Hypothetical protein.
   
 
 0.565
ramA2
Bacterial alpha-L-rhamnosidase.
 
     0.565
dxs_3
1-deoxy-D-xylulose-5-phosphate synthase.
 
     0.548
AQR93592.1
Fibronectin type III domain protein.
  
 0.487
celD
Endoglucanase D precursor.
  
 0.487
celS
Endoglucanase S precursor; Belongs to the glycosyl hydrolase 12 (cellulase H) family.
  
 0.487
celK
Cellulose 1,4-beta-cellobiosidase precursor.
  
 0.487
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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