STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
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[Homology]
Score
aguA_2Xylan alpha-(1->2)-glucuronosidase; Belongs to the glycosyl hydrolase 67 family. (700 aa)    
Predicted Functional Partners:
xynY_1
Endo-1,4-beta-xylanase Y precursor.
 
   
 0.804
xsa
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.800
xynB_1
Endo-1,4-beta-xylanase B precursor.
 
   
 0.793
AQR97380.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.771
AQR97297.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.769
AQR96651.1
Extracellular endo-alpha-(1->5)-L-arabinanase precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.766
xynA
Endo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
   
 0.765
AQR97306.1
Hypothetical protein.
  
   
 0.760
hypBA1_2
Non-reducing end beta-L-arabinofuranosidase.
 
   
 0.752
xynD_2
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
 0.740
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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