STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97281.1Hypothetical protein. (655 aa)    
Predicted Functional Partners:
lacF_3
Lactose transport system permease protein LacF.
  
 0.805
sugC_1
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
 0.782
sugC_2
Trehalose import ATP-binding protein SugC; Belongs to the ABC transporter superfamily.
  
 0.782
ugpC
Sn-glycerol-3-phosphate import ATP-binding protein UgpC; Belongs to the ABC transporter superfamily.
  
 0.782
yesO_2
Putative ABC transporter substrate-binding protein YesO.
  
 0.722
yteP_1
Putative multiple-sugar transport system permease YteP.
  
 0.661
yteP_2
Putative multiple-sugar transport system permease YteP.
  
 0.661
ycjO_1
Inner membrane ABC transporter permease protein YcjO.
  
 0.631
lacF_1
Lactose transport system permease protein LacF.
  
 0.631
ycjO_2
Inner membrane ABC transporter permease protein YcjO.
  
 0.631
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: medium (46%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.