STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR97297.1Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family. (512 aa)    
Predicted Functional Partners:
xynD_1
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
 
     0.946
AQR97299.1
Reducing end xylose-releasing exo-oligoxylanase.
 
 
 0.932
xynY_1
Endo-1,4-beta-xylanase Y precursor.
 
  
 0.916
xynD_2
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
   
 0.863
xynC_1
Glucuronoxylanase XynC precursor; Belongs to the glycosyl hydrolase 30 family.
 
 
 0.862
xynB_1
Endo-1,4-beta-xylanase B precursor.
 
  
 0.830
xynZ_2
Endo-1,4-beta-xylanase Z precursor.
 
  
 0.824
xylB4
Non-reducing end alpha-L-arabinofuranosidase BoGH43A precursor; Belongs to the glycosyl hydrolase 43 family.
 
   
0.815
AQR97306.1
Hypothetical protein.
 
  
 0.803
abf2
Intracellular exo-alpha-L-arabinofuranosidase 2.
 
  
 0.784
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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