Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
yteP_2Putative multiple-sugar transport system permease YteP. (319 aa)    
Predicted Functional Partners:
AQR97302.1
Hypothetical protein.
 
 
 0.996
araQ_9
L-arabinose transport system permease protein AraQ.
 
 
 0.995
araQ_1
L-arabinose transport system permease protein AraQ.
 
 
 0.983
lipO
Lipoprotein LipO precursor.
 
 
 0.981
AQR96758.1
Bacterial extracellular solute-binding protein.
 
 
 0.973
AQR96739.1
Hypothetical protein.
 
 
 0.967
yteP_1
Putative multiple-sugar transport system permease YteP.
  
  
 
0.903
AQR97299.1
Reducing end xylose-releasing exo-oligoxylanase.
 
     0.880
malG
Maltose transport system permease protein MalG.
  
  
 0.841
araQ_12
L-arabinose transport system permease protein AraQ.
 
 
 0.840
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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