STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97309.1Hypothetical protein. (571 aa)    
Predicted Functional Partners:
AQR97302.1
Hypothetical protein.
  
   
 0.753
AQR97299.1
Reducing end xylose-releasing exo-oligoxylanase.
 
   
 0.746
AQR93489.1
Hypothetical protein.
  
 
 0.716
lipO
Lipoprotein LipO precursor.
  
   
 0.710
celE
Endoglucanase E precursor.
  
     0.694
AQR97295.1
Putative response regulatory protein.
  
     0.640
AQR97306.1
Hypothetical protein.
  
   0.617
celCCF
Endoglucanase F precursor.
 
 
 0.592
pelL_1
Pectate lyase L precursor.
 
 0.546
AQR93488.1
Phage tail protein.
  
   0.534
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.