STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
xyl3AXylan 1,4-beta-xylosidase precursor. (710 aa)    
Predicted Functional Partners:
celD
Endoglucanase D precursor.
  
  
 0.945
AQR96593.1
Alpha-xylosidase BoGH31A precursor; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.910
AQR97326.1
Alpha-xylosidase BoGH31A precursor; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.910
AQR97328.1
Alpha-xylosidase BoGH31A precursor; Belongs to the glycosyl hydrolase 31 family.
  
 
 0.910
scrB
Sucrose-6-phosphate hydrolase; Enables the bacterium to metabolize sucrose as a sole carbon source; Belongs to the glycosyl hydrolase 32 family.
   
 
 0.904
bglB
Thermostable beta-glucosidase B.
 
  
 
0.758
xsa
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
   
 0.737
bglB-2
Beta-glucosidase BoGH3A precursor.
  
  
 
0.736
bglX_3
Periplasmic beta-glucosidase precursor.
  
  
 
0.726
bglX_2
Periplasmic beta-glucosidase precursor; Belongs to the glycosyl hydrolase 3 family.
  
  
 
0.721
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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