Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
hcnB_2Hydrogen cyanide synthase subunit HcnB. (109 aa)    
Predicted Functional Partners:
hcnB_3
Hydrogen cyanide synthase subunit HcnB.
 
 
 0.968
hcnC
Hydrogen cyanide synthase subunit HcnC precursor.
 
    0.960
hcnA
Hydrogen cyanide synthase subunit HcnA.
 
 
 0.956
gltB_2
Ferredoxin-dependent glutamate synthase 1.
  
 
 0.947
ala
Alanine dehydrogenase.
 
     0.835
AQR93232.1
ferredoxin--NADP reductase.
 
  
 0.786
hcnB_1
Hydrogen cyanide synthase subunit HcnB.
 
  
 0.769
soxA
Monomeric sarcosine oxidase.
  
   
 0.715
AQR93544.1
Hypothetical protein.
 
    0.708
mmgC
acyl-CoA dehydrogenase.
  
 
 0.701
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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