STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pgl_36-phosphogluconolactonase. (353 aa)    
Predicted Functional Partners:
pgl_1
6-phosphogluconolactonase.
  
  
 
0.912
AQR96762.1
Trehalose utilization.
  
     0.570
lacX
Aldose 1-epimerase.
 
   
 0.504
xynB1
Alpha/beta hydrolase fold protein.
  
    0.480
ilvD_2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
  
  
  0.473
xynZ_1
Endo-1,4-beta-xylanase Z precursor.
  
     0.466
yqfL
Putative pyruvate, phosphate dikinase regulatory protein; Bifunctional serine/threonine kinase and phosphorylase involved in the regulation of the pyruvate, phosphate dikinase (PPDK) by catalyzing its phosphorylation/dephosphorylation.
   
    0.426
mro
Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer.
 
   
 0.419
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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