STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97405.1DNA-binding transcriptional regulator HexR. (272 aa)    
Predicted Functional Partners:
bglF_9
PTS system beta-glucoside-specific EIIBCA component.
 
  
 0.748
AQR94816.1
Hypothetical protein.
  
     0.560
AQR97407.1
3-hexulose-6-phosphate synthase.
       0.501
bglH_9
aryl-phospho-beta-D-glucosidase BglH; Belongs to the glycosyl hydrolase 1 family.
  
    0.483
bglF_3
PTS system beta-glucoside-specific EIIBCA component.
 
  
 0.481
hxlB
3-hexulose-6-phosphate isomerase.
       0.481
bglF_1
PTS system beta-glucoside-specific EIIBCA component.
 
  
 0.425
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.420
bglF_2
PTS system beta-glucoside-specific EIIBCA component.
 
  
 0.419
glmM
Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family.
  
 
 0.418
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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