STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hxlB3-hexulose-6-phosphate isomerase. (180 aa)    
Predicted Functional Partners:
AQR97407.1
3-hexulose-6-phosphate synthase.
 
 
 0.999
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
    
 0.852
kdgK_1
2-dehydro-3-deoxygluconokinase.
 
    0.752
proA_2
4-hydroxy-4-methyl-2-oxoglutarate aldolase.
    
  0.611
gltB_2
Ferredoxin-dependent glutamate synthase 1.
     
 0.535
kdgK_5
2-dehydro-3-deoxygluconokinase.
 
    0.521
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
 0.514
AQR96122.1
Hypothetical protein.
  
  
 0.494
bglF_9
PTS system beta-glucoside-specific EIIBCA component.
  
  
 0.486
AQR97405.1
DNA-binding transcriptional regulator HexR.
       0.481
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.