STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97407.13-hexulose-6-phosphate synthase. (207 aa)    
Predicted Functional Partners:
hxlB
3-hexulose-6-phosphate isomerase.
 
 
 0.999
rpiA_2
Ribose-5-phosphate isomerase A; Catalyzes the reversible conversion of ribose-5-phosphate to ribulose 5-phosphate.
 
  
 0.931
rpiA_1
Ribose-5-phosphate isomerase A.
    
 0.922
rpe
Ribulose-phosphate 3-epimerase; Belongs to the ribulose-phosphate 3-epimerase family.
    
 0.910
ywlF
Putative sugar phosphate isomerase YwlF.
     
 0.902
kduD_1
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
  
  
  0.830
uxuA_1
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
     
 0.810
uxuA_2
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
     
 0.810
uxuA_4
Mannonate dehydratase; Catalyzes the dehydration of D-mannonate.
     
 0.810
kduD_2
2-dehydro-3-deoxy-D-gluconate 5-dehydrogenase.
     
  0.800
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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