STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
malHMaltose-6'-phosphate glucosidase MalH. (441 aa)    
Predicted Functional Partners:
malP_2
PTS system maltose-specific EIICB component.
 
 
 0.989
malX_2
PTS system maltose- and glucose-specific EIICB component.
 
 
 0.964
treB
PTS system trehalose-specific EIIBC component.
 
 
 0.934
crr_1
Glucose-specific phosphotransferase enzyme IIA component.
    
 0.913
crr_2
Glucose-specific phosphotransferase enzyme IIA component.
    
 0.913
treA
Trehalose-6-phosphate hydrolase.
   
 
 0.906
pagL
Phospho-alpha-glucosidase PagL.
  
  
 
0.905
AQR95411.1
Hypothetical protein.
 
 
 0.813
glvR_1
HTH-type transcriptional regulator GlvR.
 
  
 0.765
murR_2
HTH-type transcriptional regulator MurR.
 
  
 0.729
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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