STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msmE_2Multiple sugar-binding protein precursor. (416 aa)    
Predicted Functional Partners:
araQ_10
L-arabinose transport system permease protein AraQ.
 
 0.983
araP_4
L-arabinose transport system permease protein AraP.
 
 0.981
ycjO_1
Inner membrane ABC transporter permease protein YcjO.
 
 0.924
araQ_12
L-arabinose transport system permease protein AraQ.
 
 0.920
araQ_2
L-arabinose transport system permease protein AraQ.
 
 0.915
lacF_1
Lactose transport system permease protein LacF.
 
 0.894
ugpA_1
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
 0.892
araQ_11
L-arabinose transport system permease protein AraQ.
 
 0.891
ugpA_3
Sn-glycerol-3-phosphate transport system permease protein UgpA.
 
 0.885
araP_3
L-arabinose transport system permease protein AraP.
 
 0.880
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.