STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AQR97436.1Stress responsive A/B barrel domain protein. (95 aa)    
Predicted Functional Partners:
AQR97924.1
Stress responsive A/B barrel domain protein.
  
     0.761
fabG_9
3-oxoacyl-[acyl-carrier-protein] reductase FabG.
    
 0.649
gltB_2
Ferredoxin-dependent glutamate synthase 1.
    
  0.524
dmdA_1
2,3-dimethylmalate dehydratase large subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate.
     
  0.517
dmdB
2,3-dimethylmalate dehydratase small subunit; Catalyzes the isomerization between 2-isopropylmalate and 3- isopropylmalate, via the formation of 2-isopropylmaleate. Belongs to the LeuD family. LeuD type 2 subfamily.
     
  0.517
AQR93908.1
Hypothetical protein; Belongs to the UPF0473 family.
  
     0.482
AQR96739.1
Hypothetical protein.
  
    0.482
ilvD_1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
     
  0.430
ilvD_2
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
     
  0.430
minD
Septum site-determining protein MinD.
   
    0.414
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
Server load: low (38%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.