Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
dgoA2-dehydro-3-deoxy-6-phosphogalactonate aldolase. (214 aa)    
Predicted Functional Partners:
kdgK_3
2-dehydro-3-deoxygluconokinase.
 
 
 0.987
kdgK_1
2-dehydro-3-deoxygluconokinase.
 
 
 0.985
gap
Glyceraldehyde-3-phosphate dehydrogenase; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
  
 
 0.924
kdgA_1
KHG/KDPG aldolase.
  
  
 
0.917
gapN
NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Belongs to the aldehyde dehydrogenase family.
    
 0.908
kdgA_2
KHG/KDPG aldolase.
  
  
 
0.906
hprA
Glycerate dehydrogenase; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
    
  0.906
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 
 0.856
pyk_1
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.841
pyk_2
Pyruvate kinase; Belongs to the pyruvate kinase family.
    
 0.841
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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