Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Neighborhood
Gene Fusion
Co-occurrence
Co-expression
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[Homology]
Score
epr_2Minor extracellular protease Epr precursor. (419 aa)    
Predicted Functional Partners:
AQR97481.1
Hypothetical protein.
 
   
 0.711
AQR97482.1
Hypothetical protein; Anaerobic sulfatase-maturating enzyme homolog YdeM.
 
   
 0.597
AQR94629.1
Phenolphthiocerol synthesis polyketide synthase type I Pks15/1.
 
 0.583
AQR93672.1
Thermophilic serine proteinase precursor.
 
  
 0.573
AQR97479.1
Hypothetical protein.
       0.498
eryA
Erythronolide synthase, modules 3 and 4.
 
   
 0.478
msbA2
Putative ABC transporter ATP-binding protein.
  
 
 0.463
eccCa1
ESX-1 secretion system protein EccCa1.
  
 
 0.457
spoIIIE
DNA translocase SpoIIIE.
  
 
 0.457
tycA
Tyrocidine synthase 1; Belongs to the ATP-dependent AMP-binding enzyme family.
  
   
 0.455
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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