STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97481.1Hypothetical protein. (368 aa)    
Predicted Functional Partners:
AQR97482.1
Hypothetical protein; Anaerobic sulfatase-maturating enzyme homolog YdeM.
 
     0.936
msbA2
Putative ABC transporter ATP-binding protein.
 
    0.827
chuR
Anaerobic sulfatase-maturating enzyme.
 
     0.760
AQR97480.1
Hypothetical protein.
       0.737
epr_2
Minor extracellular protease Epr precursor.
 
     0.707
AQR95938.1
Hypothetical protein.
  
     0.660
AQR97479.1
Hypothetical protein.
       0.562
AQR94865.1
Zinc-responsive transcriptional regulator.
  
    0.521
azoR2
FMN-dependent NADH-azoreductase 2.
  
     0.489
AQR94801.1
Hypothetical protein.
  
     0.462
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.