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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
msbA2Putative ABC transporter ATP-binding protein. (583 aa)    
Predicted Functional Partners:
AQR97481.1
Hypothetical protein.
 
    0.827
AQR97482.1
Hypothetical protein; Anaerobic sulfatase-maturating enzyme homolog YdeM.
       0.773
AQR97480.1
Hypothetical protein.
       0.737
dnaK
Chaperone protein DnaK; Acts as a chaperone; Belongs to the heat shock protein 70 family.
  
 0.708
hscC_1
Chaperone protein HscC; Belongs to the heat shock protein 70 family.
  
 0.663
lagD
lactococcin-G-processing and transport ATP-binding protein LagD.
 
 
 
0.660
dnaJ_2
Chaperone protein DnaJ.
  
 
 0.644
hscC_2
Chaperone protein HscC; Belongs to the heat shock protein 70 family.
  
 0.615
ftsH3
ATP-dependent zinc metalloprotease FtsH 3; Acts as a processive, ATP-dependent zinc metallopeptidase for both cytoplasmic and membrane proteins. Plays a role in the quality control of integral membrane proteins; Belongs to the AAA ATPase family. In the central section; belongs to the AAA ATPase family.
 
   
 0.573
AQR97479.1
Hypothetical protein.
       0.562
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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