STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97492.1Putative FAD-linked oxidoreductase. (526 aa)    
Predicted Functional Partners:
glpC
Anaerobic glycerol-3-phosphate dehydrogenase subunit C.
 
 
 0.888
pchF
4-cresol dehydrogenase [hydroxylating] flavoprotein subunit.
 
    
0.757
acrA_1
acryloyl-CoA reductase electron transfer subunit beta.
 
 
 0.727
acrB_2
acryloyl-CoA reductase electron transfer subunit gamma.
 
 
 0.710
pyk_1
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.672
pyk_2
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
 0.672
etfA
Electron transfer flavoprotein subunit alpha.
  
 
 0.666
acrA_2
acryloyl-CoA reductase electron transfer subunit beta.
  
 
 0.666
acrA_4
acryloyl-CoA reductase electron transfer subunit beta.
  
 
 0.666
mmgC
acyl-CoA dehydrogenase.
  
 
 0.660
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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