STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQR97527.1Hypothetical protein. (320 aa)    
Predicted Functional Partners:
AQR97523.1
Tetratricopeptide repeat protein.
 
     0.846
AQR97524.1
Anaerobic benzoate catabolism transcriptional regulator.
 
     0.829
AQR93057.1
Putative RNA polymerase sigma factor SigI.
  
     0.766
AQR97526.1
RNase H.
 
     0.758
AQR93234.1
Endodeoxyribonuclease RusA.
  
     0.754
AQR97735.1
Hypothetical protein.
 
     0.749
AQR93767.1
Photosystem I assembly protein Ycf3.
  
     0.747
AQR97679.1
CYTH domain protein.
  
     0.743
AQR93772.1
Hypothetical protein.
  
     0.738
AQR93770.1
Hypothetical protein.
  
     0.737
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.