Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
sufS_2Cysteine desulfurase SufS. (434 aa)    
Predicted Functional Partners:
sufU
Zinc-dependent sulfurtransferase SufU.
 
 0.977
sufC
Vegetative protein 296.
 
 
 0.964
sufD
FeS cluster assembly protein SufD.
 0.961
sufB
FeS cluster assembly protein SufB.
 
 0.960
iscU
Iron-sulfur cluster assembly scaffold protein IscU.
  
 0.958
mccB
Cystathionine gamma-lyase.
    
 0.935
sufS_1
Cysteine desulfurase SufS; Belongs to the class-V pyridoxal-phosphate-dependent aminotransferase family.
  
  
 
0.922
trxB_1
Thioredoxin reductase.
  
 
  0.920
trxB_2
Thioredoxin reductase.
  
 
  0.920
AQR94675.1
Hypothetical protein.
  
 0.892
Your Current Organism:
Clostridium saccharoperbutylacetonicum
NCBI taxonomy Id: 36745
Other names: ATCC 27021, C. saccharoperbutylacetonicum, Clostridium saccharoperbutylacetonicum Keis et al. 2001, DSM 14923, NCIMB 12606, strain N1-4 (HMT)
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